q-bio.GN · 2026-07-23 · No. 62

Genomics, 2026-07-23.

1 new papers in q-bio.GN. Titles, authors, abstracts. Links to arXiv. Want this in your inbox every morning? Subscribe →

01 — The papers

1 entries
  1. 01

    Causal dictionary learning reveals and validates transcription-factor binding features in genomic language models

    Sarwan Ali

    q-bio.GN · cs.AI · cs.LG

    Genomic language models achieve strong performance across regulatory-genomics tasks, yet what these models internally represent remains opaque, and the field lacks a principled procedure for verifying that an apparent ``concept'' inside a model is real rather than an artifact of sequence composition. We introduce a framework that combines sparse dictionary learning with causal intervention to extract, validate, and causally test interpretable...

    arxiv.org/abs/2607.19618 · PDF

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